Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.13□□□□□ -0.63
Cdx1P18111 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.13□□□□□ -0.63
Cdx1P18111 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.13□□□□□ -0.63
Cdx1P18111 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdx1P18111 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.13□□□□□ -0.63
Cdx1P18111 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdx1P18111 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdx1P18111 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdx1P18111 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdx1P18111 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdx1P18111 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdx1P18111 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdx1P18111 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cdx1P18111 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdx1P18111 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.12□□□□□ -0.63
Cdx1P18111 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.12□□□□□ -0.63
Cdx1P18111 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdx1P18111 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx1P18111 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx1P18111 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx1P18111 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx1P18111 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx1P18111 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx1P18111 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.11□□□□□ -0.63
Cdx1P18111 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Cdx1P18111 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.11□□□□□ -0.63
Cdx1P18111 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdx1P18111 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdx1P18111 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cdx1P18111 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdx1P18111 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cdx1P18111 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.11□□□□□ -0.63
Cdx1P18111 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.11□□□□□ -0.63
Cdx1P18111 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdx1P18111 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Cdx1P18111 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cdx1P18111 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx1P18111 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms