Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx1P13297 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx1P13297 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.1□□□□□ -0.31
Msx1P13297 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Gm15074-201ENSMUST00000117603 936 ntBASIC13.1□□□□□ -0.31
Msx1P13297 Gm14776-201ENSMUST00000121029 887 ntBASIC13.1□□□□□ -0.31
Msx1P13297 Gm14126-201ENSMUST00000122345 395 ntBASIC13.1□□□□□ -0.31
Msx1P13297 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.1□□□□□ -0.31
Msx1P13297 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.1□□□□□ -0.31
Msx1P13297 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.1□□□□□ -0.31
Msx1P13297 Gm37293-201ENSMUST00000191658 295 ntBASIC13.1□□□□□ -0.31
Msx1P13297 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.1□□□□□ -0.31
Msx1P13297 Gm45841-201ENSMUST00000207700 164 ntBASIC13.1□□□□□ -0.31
Msx1P13297 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.1□□□□□ -0.31
Msx1P13297 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Msx1P13297 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Msx1P13297 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Msx1P13297 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.1□□□□□ -0.31
Msx1P13297 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Msx1P13297 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.1□□□□□ -0.31
Msx1P13297 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Msx1P13297 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx1P13297 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx1P13297 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.09□□□□□ -0.31
Msx1P13297 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Msx1P13297 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.09□□□□□ -0.31
Msx1P13297 Gm5354-201ENSMUST00000182417 973 ntBASIC13.09□□□□□ -0.31
Msx1P13297 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.09□□□□□ -0.31
Msx1P13297 Gm28911-201ENSMUST00000188837 117 ntBASIC13.09□□□□□ -0.31
Msx1P13297 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.09□□□□□ -0.31
Msx1P13297 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.09□□□□□ -0.31
Msx1P13297 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.09□□□□□ -0.31
Msx1P13297 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.09□□□□□ -0.31
Msx1P13297 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Msx1P13297 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx1P13297 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Msx1P13297 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Msx1P13297 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx1P13297 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.08□□□□□ -0.32
Msx1P13297 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Msx1P13297 Gm12585-201ENSMUST00000117307 290 ntBASIC13.08□□□□□ -0.32
Msx1P13297 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx1P13297 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.08□□□□□ -0.32
Msx1P13297 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.08□□□□□ -0.32
Msx1P13297 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx1P13297 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.08□□□□□ -0.32
Msx1P13297 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx1P13297 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx1P13297 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms