Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Mir698-201ENSMUST00000102164 109 ntBASIC14.88□□□□□ -0.03
RaraP11416 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RaraP11416 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RaraP11416 Gm6415-201ENSMUST00000118488 348 ntBASIC14.88□□□□□ -0.03
RaraP11416 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.88□□□□□ -0.03
RaraP11416 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.88□□□□□ -0.03
RaraP11416 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.88□□□□□ -0.03
RaraP11416 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Gm24513-201ENSMUST00000174964 138 ntBASIC14.88□□□□□ -0.03
RaraP11416 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 Gm27397-201ENSMUST00000184997 107 ntBASIC14.88□□□□□ -0.03
RaraP11416 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.88□□□□□ -0.03
RaraP11416 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RaraP11416 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RaraP11416 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.87□□□□□ -0.03
RaraP11416 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Gm15460-201ENSMUST00000118147 391 ntBASIC14.87□□□□□ -0.03
RaraP11416 Gm15693-201ENSMUST00000120470 637 ntBASIC14.87□□□□□ -0.03
RaraP11416 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RaraP11416 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RaraP11416 Gm10253-201ENSMUST00000194270 940 ntBASIC14.87□□□□□ -0.03
RaraP11416 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Gm44719-201ENSMUST00000206404 149 ntBASIC14.87□□□□□ -0.03
RaraP11416 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.87□□□□□ -0.03
RaraP11416 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RaraP11416 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RaraP11416 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.87□□□□□ -0.03
RaraP11416 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RaraP11416 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.86□□□□□ -0.03
RaraP11416 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Gm25925-201ENSMUST00000158314 306 ntBASIC14.86□□□□□ -0.03
RaraP11416 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RaraP11416 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.86□□□□□ -0.03
RaraP11416 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.86□□□□□ -0.03
RaraP11416 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RaraP11416 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RaraP11416 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RaraP11416 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RaraP11416 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RaraP11416 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms