Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ApoeP08226 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.01□□□□□ -0.33
ApoeP08226 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Gm18737-201ENSMUST00000173594 937 ntBASIC13.01□□□□□ -0.33
ApoeP08226 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 AA619741-201ENSMUST00000195095 646 ntBASIC13.01□□□□□ -0.33
ApoeP08226 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.01□□□□□ -0.33
ApoeP08226 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.01□□□□□ -0.33
ApoeP08226 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ApoeP08226 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ApoeP08226 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13□□□□□ -0.33
ApoeP08226 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
ApoeP08226 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Gm12892-201ENSMUST00000117367 1146 ntBASIC13□□□□□ -0.33
ApoeP08226 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13□□□□□ -0.33
ApoeP08226 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13□□□□□ -0.33
ApoeP08226 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13□□□□□ -0.33
ApoeP08226 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13□□□□□ -0.33
ApoeP08226 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13□□□□□ -0.33
ApoeP08226 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ApoeP08226 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ApoeP08226 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ApoeP08226 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ApoeP08226 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ApoeP08226 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ApoeP08226 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.99□□□□□ -0.33
ApoeP08226 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.99□□□□□ -0.33
ApoeP08226 Gm18195-201ENSMUST00000207604 706 ntBASIC12.99□□□□□ -0.33
ApoeP08226 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.99□□□□□ -0.33
ApoeP08226 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.99□□□□□ -0.33
ApoeP08226 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.99□□□□□ -0.33
ApoeP08226 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ApoeP08226 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms