Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.55□□□□□ -0.4
Col4a2P08122 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Gm11591-201ENSMUST00000120063 702 ntBASIC12.55□□□□□ -0.4
Col4a2P08122 Gm11964-201ENSMUST00000120982 444 ntBASIC12.55□□□□□ -0.4
Col4a2P08122 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.55□□□□□ -0.4
Col4a2P08122 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.55□□□□□ -0.4
Col4a2P08122 Gm2383-201ENSMUST00000181461 807 ntBASIC12.55□□□□□ -0.4
Col4a2P08122 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.55□□□□□ -0.4
Col4a2P08122 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col4a2P08122 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col4a2P08122 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Col4a2P08122 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col4a2P08122 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a2P08122 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm4986-201ENSMUST00000119731 549 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Gm14381-201ENSMUST00000122105 414 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.54□□□□□ -0.4
Col4a2P08122 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm27320-201ENSMUST00000184892 109 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm8227-201ENSMUST00000223306 571 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col4a2P08122 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm13297-201ENSMUST00000120205 934 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Col4a2P08122 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Gm16570-201ENSMUST00000161951 436 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Gm17376-201ENSMUST00000166016 84 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.54□□□□□ -0.4
Col4a2P08122 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.54□□□□□ -0.4
Col4a2P08122 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col4a2P08122 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col4a2P08122 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a2P08122 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col4a2P08122 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col4a2P08122 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Col4a2P08122 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.53□□□□□ -0.4
Col4a2P08122 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.53□□□□□ -0.4
Col4a2P08122 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col4a2P08122 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col4a2P08122 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col4a2P08122 Gm5781-201ENSMUST00000219792 443 ntBASIC12.53□□□□□ -0.4
Col4a2P08122 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col4a2P08122 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a2P08122 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a2P08122 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Col4a2P08122 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms