Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.51□□□□□ -0.25
Hoxa4P06798 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa4P06798 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.51□□□□□ -0.25
Hoxa4P06798 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.51□□□□□ -0.25
Hoxa4P06798 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxa4P06798 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm12403-201ENSMUST00000121384 959 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxa4P06798 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxa4P06798 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.49□□□□□ -0.25
Hoxa4P06798 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxa4P06798 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hoxa4P06798 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxa4P06798 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Hoxa4P06798 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxa4P06798 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Hoxa4P06798 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxa4P06798 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms