Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
P06344 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.25□□□□□ -0.45
P06344 Gm12091-201ENSMUST00000146791 830 ntBASIC12.25□□□□□ -0.45
P06344 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.25□□□□□ -0.45
P06344 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.25□□□□□ -0.45
P06344 Gm24420-201ENSMUST00000176676 59 ntBASIC12.25□□□□□ -0.45
P06344 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Gm6745-201ENSMUST00000199216 526 ntBASIC12.25□□□□□ -0.45
P06344 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
P06344 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.25□□□□□ -0.45
P06344 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.25□□□□□ -0.45
P06344 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.25□□□□□ -0.45
P06344 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.25□□□□□ -0.45
P06344 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.25□□□□□ -0.45
P06344 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
P06344 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.25□□□□□ -0.45
P06344 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.25□□□□□ -0.45
P06344 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.25□□□□□ -0.45
P06344 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.25□□□□□ -0.45
P06344 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
P06344 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
P06344 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
P06344 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
P06344 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
P06344 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
P06344 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.24□□□□□ -0.45
P06344 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.24□□□□□ -0.45
P06344 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.24□□□□□ -0.45
P06344 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.24□□□□□ -0.45
P06344 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
P06344 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
P06344 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06344 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.23□□□□□ -0.45
P06344 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.23□□□□□ -0.45
P06344 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06344 Gm12490-201ENSMUST00000120255 560 ntBASIC12.23□□□□□ -0.45
P06344 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.23□□□□□ -0.45
P06344 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P06344 Gm5745-201ENSMUST00000183748 313 ntBASIC12.23□□□□□ -0.45
P06344 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.23□□□□□ -0.45
P06344 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms