Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.47□□□□□ -0.41
Lmx1bO88609 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lmx1bO88609 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.47□□□□□ -0.41
Lmx1bO88609 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.47□□□□□ -0.41
Lmx1bO88609 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lmx1bO88609 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.47□□□□□ -0.41
Lmx1bO88609 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.46□□□□□ -0.41
Lmx1bO88609 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.46□□□□□ -0.41
Lmx1bO88609 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Gm18187-201ENSMUST00000196476 984 ntBASIC12.46□□□□□ -0.41
Lmx1bO88609 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.46□□□□□ -0.41
Lmx1bO88609 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lmx1bO88609 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.46□□□□□ -0.41
Lmx1bO88609 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lmx1bO88609 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.46□□□□□ -0.42
Lmx1bO88609 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Lmx1bO88609 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lmx1bO88609 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Lmx1bO88609 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lmx1bO88609 Gm15678-201ENSMUST00000117573 960 ntBASIC12.45□□□□□ -0.42
Lmx1bO88609 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms