Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm9726-201ENSMUST00000180321 678 ntBASIC11.51□□□□□ -0.57
Pfdn2O70591 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm28659-201ENSMUST00000188013 759 ntBASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm19087-201ENSMUST00000191430 946 ntBASIC11.51□□□□□ -0.57
Pfdn2O70591 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm45167-201ENSMUST00000208007 322 ntBASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm10060-201ENSMUST00000212002 111 ntBASIC11.51□□□□□ -0.57
Pfdn2O70591 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.51□□□□□ -0.57
Pfdn2O70591 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn2O70591 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn2O70591 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.5□□□□□ -0.57
Pfdn2O70591 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.5□□□□□ -0.57
Pfdn2O70591 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.5□□□□□ -0.57
Pfdn2O70591 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.5□□□□□ -0.57
Pfdn2O70591 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn2O70591 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn2O70591 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.49□□□□□ -0.57
Pfdn2O70591 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.49□□□□□ -0.57
Pfdn2O70591 Gm25925-201ENSMUST00000158314 306 ntBASIC11.49□□□□□ -0.57
Pfdn2O70591 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.49□□□□□ -0.57
Pfdn2O70591 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pfdn2O70591 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms