Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stra6O70491 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stra6O70491 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stra6O70491 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.15■□□□□ 0.02
Stra6O70491 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Stra6O70491 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Stra6O70491 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Stra6O70491 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Gm15770-201ENSMUST00000117498 584 ntBASIC15.14■□□□□ 0.01
Stra6O70491 Gm10156-201ENSMUST00000122364 462 ntBASIC15.14■□□□□ 0.01
Stra6O70491 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Stra6O70491 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Stra6O70491 Gm42693-201ENSMUST00000196779 631 ntBASIC15.14■□□□□ 0.01
Stra6O70491 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Stra6O70491 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.14■□□□□ 0.01
Stra6O70491 Itm2b-204ENSMUST00000228637 783 ntBASIC15.14■□□□□ 0.01
Stra6O70491 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Stra6O70491 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.14■□□□□ 0.01
Stra6O70491 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Stra6O70491 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stra6O70491 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.14■□□□□ 0.01
Stra6O70491 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.14■□□□□ 0.01
Stra6O70491 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Stra6O70491 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.13■□□□□ 0.01
Stra6O70491 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 Gm12384-201ENSMUST00000119228 919 ntBASIC15.13■□□□□ 0.01
Stra6O70491 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Gm27331-201ENSMUST00000183705 60 ntBASIC15.13■□□□□ 0.01
Stra6O70491 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.13■□□□□ 0.01
Stra6O70491 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.13■□□□□ 0.01
Stra6O70491 Gm26315-201ENSMUST00000083890 321 ntBASIC15.13■□□□□ 0.01
Stra6O70491 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stra6O70491 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Stra6O70491 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Stra6O70491 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Stra6O70491 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.12■□□□□ 0.01
Stra6O70491 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Stra6O70491 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Gm43818-201ENSMUST00000200605 466 ntBASIC15.12■□□□□ 0.01
Stra6O70491 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Gm10478-201ENSMUST00000084451 396 ntBASIC15.12■□□□□ 0.01
Stra6O70491 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Stra6O70491 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stra6O70491 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
Stra6O70491 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.12■□□□□ 0.01
Stra6O70491 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Stra6O70491 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stra6O70491 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms