Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.59□□□□□ -0.23
Pdlim1O70400 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.59□□□□□ -0.23
Pdlim1O70400 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pdlim1O70400 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdlim1O70400 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim1O70400 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdlim1O70400 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pdlim1O70400 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.58□□□□□ -0.24
Pdlim1O70400 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.58□□□□□ -0.24
Pdlim1O70400 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.58□□□□□ -0.24
Pdlim1O70400 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.58□□□□□ -0.24
Pdlim1O70400 Gm19078-201ENSMUST00000206311 727 ntBASIC13.58□□□□□ -0.24
Pdlim1O70400 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pdlim1O70400 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pdlim1O70400 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdlim1O70400 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm12859-201ENSMUST00000117834 427 ntBASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm11524-201ENSMUST00000119349 807 ntBASIC13.57□□□□□ -0.24
Pdlim1O70400 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.57□□□□□ -0.24
Pdlim1O70400 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.57□□□□□ -0.24
Pdlim1O70400 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm43094-201ENSMUST00000196549 921 ntBASIC13.57□□□□□ -0.24
Pdlim1O70400 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.57□□□□□ -0.24
Pdlim1O70400 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.57□□□□□ -0.24
Pdlim1O70400 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim1O70400 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.57□□□□□ -0.24
Pdlim1O70400 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim1O70400 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim1O70400 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms