Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp8O70138 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.74■□□□□ 0.27
Mmp8O70138 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.74■□□□□ 0.27
Mmp8O70138 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mmp8O70138 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.74■□□□□ 0.27
Mmp8O70138 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp8O70138 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp8O70138 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.73■□□□□ 0.27
Mmp8O70138 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.73■□□□□ 0.27
Mmp8O70138 Gm45668-201ENSMUST00000211271 493 ntBASIC16.73■□□□□ 0.27
Mmp8O70138 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp8O70138 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Mmp8O70138 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Mmp8O70138 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp8O70138 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mmp8O70138 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp8O70138 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Mmp8O70138 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mmp8O70138 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.72■□□□□ 0.27
Mmp8O70138 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Mir7654-201ENSMUST00000185082 70 ntBASIC16.72■□□□□ 0.27
Mmp8O70138 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.72■□□□□ 0.27
Mmp8O70138 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.72■□□□□ 0.27
Mmp8O70138 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.72■□□□□ 0.27
Mmp8O70138 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.72■□□□□ 0.27
Mmp8O70138 Gm15823-201ENSMUST00000064305 670 ntBASIC16.72■□□□□ 0.27
Mmp8O70138 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mmp8O70138 Matn2-206ENSMUST00000228570 2798 ntBASIC16.72■□□□□ 0.27
Mmp8O70138 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp8O70138 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.71■□□□□ 0.27
Mmp8O70138 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Mmp8O70138 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Mmp8O70138 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.71■□□□□ 0.27
Mmp8O70138 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.71■□□□□ 0.27
Mmp8O70138 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.71■□□□□ 0.27
Mmp8O70138 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.71■□□□□ 0.27
Mmp8O70138 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.71■□□□□ 0.27
Mmp8O70138 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.71■□□□□ 0.27
Mmp8O70138 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mmp8O70138 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.71■□□□□ 0.27
Mmp8O70138 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms