Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.78□□□□□ -0.36
BckdkO55028 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.78□□□□□ -0.36
BckdkO55028 Gm11424-201ENSMUST00000121929 829 ntBASIC12.78□□□□□ -0.36
BckdkO55028 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Gm43703-201ENSMUST00000200523 763 ntBASIC12.78□□□□□ -0.36
BckdkO55028 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BckdkO55028 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BckdkO55028 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BckdkO55028 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BckdkO55028 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
BckdkO55028 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BckdkO55028 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BckdkO55028 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BckdkO55028 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BckdkO55028 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.77□□□□□ -0.37
BckdkO55028 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BckdkO55028 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.77□□□□□ -0.37
BckdkO55028 Gm28631-201ENSMUST00000190740 334 ntBASIC12.77□□□□□ -0.37
BckdkO55028 Gm29667-201ENSMUST00000190817 490 ntBASIC12.77□□□□□ -0.37
BckdkO55028 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BckdkO55028 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BckdkO55028 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.77□□□□□ -0.37
BckdkO55028 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BckdkO55028 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BckdkO55028 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
BckdkO55028 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.76□□□□□ -0.37
BckdkO55028 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BckdkO55028 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.76□□□□□ -0.37
BckdkO55028 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.76□□□□□ -0.37
BckdkO55028 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
BckdkO55028 Gm10275-202ENSMUST00000168697 495 ntBASIC12.76□□□□□ -0.37
BckdkO55028 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.76□□□□□ -0.37
BckdkO55028 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.76□□□□□ -0.37
BckdkO55028 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.76□□□□□ -0.37
BckdkO55028 Gm10275-201ENSMUST00000092620 635 ntBASIC12.76□□□□□ -0.37
BckdkO55028 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BckdkO55028 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BckdkO55028 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BckdkO55028 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BckdkO55028 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BckdkO55028 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
BckdkO55028 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BckdkO55028 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BckdkO55028 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms