Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Polr1aO35134 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Polr1aO35134 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Polr1aO35134 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Polr1aO35134 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Polr1aO35134 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Polr1aO35134 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC20.73■□□□□ 0.91
Polr1aO35134 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC20.73■□□□□ 0.91
Polr1aO35134 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Polr1aO35134 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Polr1aO35134 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC20.73■□□□□ 0.91
Polr1aO35134 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.73■□□□□ 0.91
Polr1aO35134 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Polr1aO35134 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Polr1aO35134 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Gm12012-201ENSMUST00000118857 1066 ntBASIC20.72■□□□□ 0.91
Polr1aO35134 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Gm4819-201ENSMUST00000182170 1009 ntBASIC20.72■□□□□ 0.91
Polr1aO35134 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Gm45186-201ENSMUST00000206874 478 ntBASIC20.72■□□□□ 0.91
Polr1aO35134 Gm9445-201ENSMUST00000207454 1285 ntBASIC20.72■□□□□ 0.91
Polr1aO35134 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Polr1aO35134 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr1aO35134 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC20.72■□□□□ 0.91
Polr1aO35134 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC20.71■□□□□ 0.91
Polr1aO35134 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Polr1aO35134 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC20.71■□□□□ 0.91
Polr1aO35134 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC20.71■□□□□ 0.91
Polr1aO35134 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.71■□□□□ 0.91
Polr1aO35134 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 CT030182.1-201ENSMUST00000225935 533 ntBASIC20.71■□□□□ 0.91
Polr1aO35134 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Polr1aO35134 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Polr1aO35134 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC20.7■□□□□ 0.9
Polr1aO35134 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Polr1aO35134 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Gm13665-201ENSMUST00000120830 528 ntBASIC20.7■□□□□ 0.9
Polr1aO35134 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC20.7■□□□□ 0.9
Polr1aO35134 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC20.7■□□□□ 0.9
Polr1aO35134 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC20.7■□□□□ 0.9
Polr1aO35134 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Polr1aO35134 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Gm14726-201ENSMUST00000120623 896 ntBASIC20.7■□□□□ 0.9
Polr1aO35134 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Polr1aO35134 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC20.7■□□□□ 0.9
Polr1aO35134 Gm38317-201ENSMUST00000195564 343 ntBASIC20.7■□□□□ 0.9
Polr1aO35134 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr1aO35134 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms