Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.94□□□□□ -0.18
AlyrefO08583 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.94□□□□□ -0.18
AlyrefO08583 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AlyrefO08583 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.94□□□□□ -0.18
AlyrefO08583 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.94□□□□□ -0.18
AlyrefO08583 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.94□□□□□ -0.18
AlyrefO08583 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AlyrefO08583 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AlyrefO08583 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AlyrefO08583 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
AlyrefO08583 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
AlyrefO08583 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
AlyrefO08583 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
AlyrefO08583 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Gm7467-201ENSMUST00000185173 652 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.93□□□□□ -0.18
AlyrefO08583 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Gm45098-201ENSMUST00000207179 657 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.93□□□□□ -0.18
AlyrefO08583 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.93□□□□□ -0.18
AlyrefO08583 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.93□□□□□ -0.18
AlyrefO08583 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AlyrefO08583 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AlyrefO08583 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.92□□□□□ -0.18
AlyrefO08583 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
AlyrefO08583 Gm14665-201ENSMUST00000122294 557 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.92□□□□□ -0.18
AlyrefO08583 Mir1943-201ENSMUST00000158276 73 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.92□□□□□ -0.18
AlyrefO08583 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AlyrefO08583 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms