Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm5781-201ENSMUST00000219792 443 ntBASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcf11G3X9Z4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Gm24548-201ENSMUST00000158650 108 ntBASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Gm27243-201ENSMUST00000183964 521 ntBASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Gm45865-201ENSMUST00000211815 945 ntBASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcf11G3X9Z4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Gm26185-201ENSMUST00000157692 266 ntBASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcf11G3X9Z4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm14704-201ENSMUST00000120300 874 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm4959-201ENSMUST00000197271 1044 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm6458-201ENSMUST00000211573 635 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm8227-201ENSMUST00000223306 571 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm19163-201ENSMUST00000223313 780 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gm43579-201ENSMUST00000202387 1307 ntBASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms