Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim55G3X8Y1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim55G3X8Y1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Gm24589-201ENSMUST00000116692 94 ntBASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Gm15794-201ENSMUST00000120182 631 ntBASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim55G3X8Y1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim55G3X8Y1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim55G3X8Y1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim55G3X8Y1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim55G3X8Y1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim55G3X8Y1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms