Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm16379-201ENSMUST00000161469 348 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm20482-202ENSMUST00000174729 825 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm8762-201ENSMUST00000193486 339 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Itm2b-204ENSMUST00000228637 783 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm24447-201ENSMUST00000083977 338 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.48■□□□□ 0.23
NpcdF8VQB8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NpcdF8VQB8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.47■□□□□ 0.23
NpcdF8VQB8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Gm12134-201ENSMUST00000122109 520 ntBASIC16.47■□□□□ 0.23
NpcdF8VQB8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Gm16505-201ENSMUST00000179981 232 ntBASIC16.47■□□□□ 0.23
NpcdF8VQB8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Gm6082-201ENSMUST00000215204 454 ntBASIC16.47■□□□□ 0.23
NpcdF8VQB8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.47■□□□□ 0.23
NpcdF8VQB8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NpcdF8VQB8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Gm25261-201ENSMUST00000157416 134 ntBASIC16.46■□□□□ 0.23
NpcdF8VQB8 Gm17376-201ENSMUST00000166016 84 ntBASIC16.46■□□□□ 0.23
NpcdF8VQB8 Gm2991-201ENSMUST00000173338 480 ntBASIC16.46■□□□□ 0.23
NpcdF8VQB8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NpcdF8VQB8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NpcdF8VQB8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.46■□□□□ 0.22
NpcdF8VQB8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NpcdF8VQB8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.46■□□□□ 0.22
NpcdF8VQB8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
NpcdF8VQB8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
NpcdF8VQB8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NpcdF8VQB8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.45■□□□□ 0.22
NpcdF8VQB8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms