Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm18054-201ENSMUST00000207539 555 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm18056-201ENSMUST00000207670 568 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm18061-201ENSMUST00000208350 562 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm18063-201ENSMUST00000208529 568 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm18052-201ENSMUST00000208750 559 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm5425-201ENSMUST00000214125 459 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hdm1E9Q9Q2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hdm1E9Q9Q2 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gm12384-201ENSMUST00000119228 919 ntBASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gm45880-201ENSMUST00000213041 853 ntBASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hdm1E9Q9Q2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
R3hdm1E9Q9Q2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms