Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Gm16202-201ENSMUST00000117532 544 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm8385-201ENSMUST00000058999 643 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm18212-201ENSMUST00000211678 889 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm25668-201ENSMUST00000157700 129 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm37042-201ENSMUST00000193816 581 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Gm9678-201ENSMUST00000198979 1149 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Gm14267-206ENSMUST00000226870 1209 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
ApobE9Q414 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
ApobE9Q414 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
ApobE9Q414 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm11531-201ENSMUST00000117614 555 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm2546-201ENSMUST00000182630 991 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.16□□□□□ -1.1
ApobE9Q414 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
ApobE9Q414 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC8.16□□□□□ -1.1
ApobE9Q414 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC8.16□□□□□ -1.1
ApobE9Q414 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ApobE9Q414 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ApobE9Q414 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC8.15□□□□□ -1.1
ApobE9Q414 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ApobE9Q414 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
ApobE9Q414 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC8.15□□□□□ -1.1
ApobE9Q414 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ApobE9Q414 Gm24749-201ENSMUST00000157838 343 ntBASIC8.15□□□□□ -1.1
ApobE9Q414 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC8.15□□□□□ -1.1
ApobE9Q414 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.15□□□□□ -1.1
ApobE9Q414 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ApobE9Q414 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC8.15□□□□□ -1.1
ApobE9Q414 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ApobE9Q414 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
ApobE9Q414 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms