Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh17E9PXF0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Gm5035-201ENSMUST00000215581 927 ntBASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdh17E9PXF0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm13385-201ENSMUST00000121089 220 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm17150-201ENSMUST00000165577 381 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh17E9PXF0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh17E9PXF0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms