Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm16570-201ENSMUST00000161951 436 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.32□□□□□ -0.44
Shank1D3YZU1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Shank1D3YZU1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm1335-201ENSMUST00000121653 386 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm6334-201ENSMUST00000207083 228 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.31□□□□□ -0.44
Shank1D3YZU1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shank1D3YZU1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm42627-201ENSMUST00000197347 224 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm22323-201ENSMUST00000103832 109 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm7029-201ENSMUST00000173226 450 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
Shank1D3YZU1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.3□□□□□ -0.44
Shank1D3YZU1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.29□□□□□ -0.44
Shank1D3YZU1 Gm38266-201ENSMUST00000194931 421 ntBASIC12.29□□□□□ -0.44
Shank1D3YZU1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms