Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trim30cD3YVI9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim30cD3YVI9 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.07■□□□□ 0
Trim30cD3YVI9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.06■□□□□ 0
Trim30cD3YVI9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim30cD3YVI9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim30cD3YVI9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim30cD3YVI9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim30cD3YVI9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim30cD3YVI9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim30cD3YVI9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.05■□□□□ 0
Trim30cD3YVI9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim30cD3YVI9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim30cD3YVI9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim30cD3YVI9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Gm8410-201ENSMUST00000117225 605 ntBASIC15.05■□□□□ -0
Trim30cD3YVI9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Gm13823-201ENSMUST00000119930 345 ntBASIC15.05■□□□□ -0
Trim30cD3YVI9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Gm10576-201ENSMUST00000191927 825 ntBASIC15.05■□□□□ -0
Trim30cD3YVI9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.05■□□□□ -0
Trim30cD3YVI9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trim30cD3YVI9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim30cD3YVI9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.04■□□□□ -0
Trim30cD3YVI9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Auts2-212ENSMUST00000178555 309 ntBASIC15.04■□□□□ -0
Trim30cD3YVI9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim30cD3YVI9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim30cD3YVI9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms