Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp42B2RQC2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Usp42B2RQC2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp42B2RQC2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.06■□□□□ 0.16
Usp42B2RQC2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp42B2RQC2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp42B2RQC2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp42B2RQC2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.05■□□□□ 0.16
Usp42B2RQC2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.05■□□□□ 0.16
Usp42B2RQC2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Gm5161-201ENSMUST00000075243 853 ntBASIC16.05■□□□□ 0.16
Usp42B2RQC2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp42B2RQC2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp42B2RQC2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.04■□□□□ 0.16
Usp42B2RQC2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gm17330-201ENSMUST00000221047 165 ntBASIC16.04■□□□□ 0.16
Usp42B2RQC2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.04■□□□□ 0.16
Usp42B2RQC2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp42B2RQC2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Gm12341-201ENSMUST00000119724 503 ntBASIC16.03■□□□□ 0.16
Usp42B2RQC2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp42B2RQC2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms