Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm14726-201ENSMUST00000120623 896 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm24990-201ENSMUST00000157406 323 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 AA914427-201ENSMUST00000193194 1166 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a6B1AVK5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Gm13665-201ENSMUST00000120830 528 ntBASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Gm14017-201ENSMUST00000121934 386 ntBASIC13.84□□□□□ -0.19
Col4a6B1AVK5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Gm2260-201ENSMUST00000184965 657 ntBASIC13.84□□□□□ -0.19
Col4a6B1AVK5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a6B1AVK5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Col4a6B1AVK5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a6B1AVK5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a6B1AVK5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a6B1AVK5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Col4a6B1AVK5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a6B1AVK5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms