Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav12d-1A0N8R0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Mir3113-201ENSMUST00000175478 76 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Gm27631-201ENSMUST00000184163 466 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Mir125a-201ENSMUST00000083545 68 ntBASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav12d-1A0N8R0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Mir698-201ENSMUST00000102164 109 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms