Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc194A0A140LIT1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Gm29541-201ENSMUST00000191351 678 ntBASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc194A0A140LIT1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm24543-201ENSMUST00000103867 82 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm8410-201ENSMUST00000117225 605 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm7774-201ENSMUST00000200064 533 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm6916-202ENSMUST00000205523 195 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Gm16476-201ENSMUST00000221544 139 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc194A0A140LIT1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc194A0A140LIT1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms