Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 AC124569.2-201ENSMUST00000225998 818 ntBASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Nudt18-203ENSMUST00000228768 1578 ntBASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav8-1A0A075B641 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Gm27704-201ENSMUST00000185094 107 ntBASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms