Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Mrpl40Q9Z2Q5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.82□□□□□ -0.2
Mrpl40Q9Z2Q5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Mrpl40Q9Z2Q5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm23984-201ENSMUST00000157139 203 ntBASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Mrpl40Q9Z2Q5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms