Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Gm8396-201ENSMUST00000057361 823 ntBASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Mbd1Q9Z2E2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Gm21470-201ENSMUST00000187680 696 ntBASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Mbd1Q9Z2E2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mbd1Q9Z2E2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mbd1Q9Z2E2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mbd1Q9Z2E2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mbd1Q9Z2E2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mbd1Q9Z2E2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms