Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clcf1Q9QZM3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clcf1Q9QZM3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clcf1Q9QZM3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clcf1Q9QZM3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clcf1Q9QZM3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Gm44608-201ENSMUST00000206827 855 ntBASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clcf1Q9QZM3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clcf1Q9QZM3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Gm12859-201ENSMUST00000117834 427 ntBASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clcf1Q9QZM3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms