Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube4bQ9ES00 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gm8749-201ENSMUST00000117737 331 ntBASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube4bQ9ES00 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Gm5864-201ENSMUST00000202263 970 ntBASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube4bQ9ES00 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube4bQ9ES00 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube4bQ9ES00 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ube4bQ9ES00 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms