Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.61□□□□□ -0.23
Lima1Q9ERG0 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Lima1Q9ERG0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Gm11594-201ENSMUST00000122313 162 ntBASIC13.6□□□□□ -0.23
Lima1Q9ERG0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lima1Q9ERG0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Gm13365-201ENSMUST00000121188 973 ntBASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lima1Q9ERG0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lima1Q9ERG0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lima1Q9ERG0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lima1Q9ERG0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lima1Q9ERG0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lima1Q9ERG0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms