Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Tubb3Q9ERD7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tubb3Q9ERD7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Mir1897-201ENSMUST00000122581 272 ntBASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tubb3Q9ERD7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Gm7775-201ENSMUST00000218871 853 ntBASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tubb3Q9ERD7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm15487-201ENSMUST00000122373 465 ntBASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Dupd1-202ENSMUST00000224735 548 ntBASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms