Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Mir497b-201ENSMUST00000093601 125 ntBASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chmp2aQ9DB34 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Gm29741-201ENSMUST00000192667 421 ntBASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Gm6218-201ENSMUST00000219812 628 ntBASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2aQ9DB34 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm24694-201ENSMUST00000180054 110 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm27437-201ENSMUST00000183429 107 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm27663-201ENSMUST00000184839 110 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm7730-201ENSMUST00000212486 454 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2aQ9DB34 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2aQ9DB34 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms