Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp4bQ9D8B3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Gm27306-201ENSMUST00000183970 107 ntBASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Gm38294-201ENSMUST00000192831 381 ntBASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp4bQ9D8B3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4bQ9D8B3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4bQ9D8B3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chmp4bQ9D8B3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4bQ9D8B3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp4bQ9D8B3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chmp4bQ9D8B3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Gm13223-201ENSMUST00000118609 747 ntBASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Gm15920-201ENSMUST00000118998 402 ntBASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp4bQ9D8B3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Gm25925-201ENSMUST00000158314 306 ntBASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp4bQ9D8B3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms