Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Gm27772-201ENSMUST00000184900 187 ntBASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tmem54Q9D7S1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tmem54Q9D7S1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tmem54Q9D7S1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms