Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3a3Q9D554 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Gm15173-201ENSMUST00000122049 433 ntBASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3a3Q9D554 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Gm9182-201ENSMUST00000217829 639 ntBASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3a3Q9D554 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Gm25990-201ENSMUST00000102440 86 ntBASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Gm27357-201ENSMUST00000183754 135 ntBASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3a3Q9D554 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms