Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.88□□□□□ -0.19
Ccdc130Q9D516 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc130Q9D516 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm25287-201ENSMUST00000103846 110 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm22918-201ENSMUST00000103855 110 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm6736-201ENSMUST00000166583 948 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm29310-201ENSMUST00000185468 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21825-201ENSMUST00000185728 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm29109-201ENSMUST00000185895 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21896-201ENSMUST00000186520 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21873-201ENSMUST00000186728 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21794-201ENSMUST00000187056 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21880-201ENSMUST00000187275 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21826-201ENSMUST00000187451 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21198-201ENSMUST00000188393 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21749-201ENSMUST00000189343 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21901-201ENSMUST00000189568 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm29424-201ENSMUST00000189716 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm28599-201ENSMUST00000189838 694 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21867-201ENSMUST00000189917 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm29269-201ENSMUST00000190087 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21722-201ENSMUST00000190153 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm28423-201ENSMUST00000190701 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21899-201ENSMUST00000190745 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21910-201ENSMUST00000191163 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21849-201ENSMUST00000191571 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm28678-201ENSMUST00000191593 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm20910-201ENSMUST00000193268 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm21871-201ENSMUST00000194621 696 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm18041-201ENSMUST00000218210 618 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Grk6-205ENSMUST00000224653 2976 ntBASIC13.87□□□□□ -0.19
Ccdc130Q9D516 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc130Q9D516 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm43575-201ENSMUST00000196420 516 ntBASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc130Q9D516 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc130Q9D516 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms