Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm6912-201ENSMUST00000117218 544 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm13385-201ENSMUST00000121089 220 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm8927-201ENSMUST00000181978 981 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm3222-201ENSMUST00000071282 990 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
Vps28Q9D1C8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Gm28631-201ENSMUST00000190740 334 ntBASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Mir497b-201ENSMUST00000093601 125 ntBASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps28Q9D1C8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gm37917-201ENSMUST00000194711 392 ntBASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gm18905-201ENSMUST00000205454 928 ntBASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gm19220-201ENSMUST00000222682 803 ntBASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vps28Q9D1C8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps28Q9D1C8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms