Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chaf1bQ9D0N7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Gm12350-201ENSMUST00000121208 462 ntBASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.93□□□□□ -0.34
Chaf1bQ9D0N7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chaf1bQ9D0N7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Chaf1bQ9D0N7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms