Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Gm38225-201ENSMUST00000194001 393 ntBASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Gm18057-201ENSMUST00000208220 503 ntBASIC13.68□□□□□ -0.22
Ssu72Q9CY97 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssu72Q9CY97 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Gm27631-201ENSMUST00000184163 466 ntBASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Gm2651-201ENSMUST00000203560 838 ntBASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.67□□□□□ -0.22
Ssu72Q9CY97 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssu72Q9CY97 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Gm15678-201ENSMUST00000117573 960 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Gm11025-201ENSMUST00000140773 466 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Psmb5-202ENSMUST00000227257 622 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Mir125a-201ENSMUST00000083545 68 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Mir497b-201ENSMUST00000093601 125 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.66□□□□□ -0.22
Ssu72Q9CY97 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms