Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Otud1Q9CUB6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Otud1Q9CUB6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Gm24420-201ENSMUST00000176676 59 ntBASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.04□□□□□ -0.32
Otud1Q9CUB6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Mir698-201ENSMUST00000102164 109 ntBASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.03□□□□□ -0.32
Otud1Q9CUB6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Otud1Q9CUB6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Otud1Q9CUB6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Gm12849-201ENSMUST00000120013 739 ntBASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Otud1Q9CUB6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms