Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm8927-201ENSMUST00000181978 981 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm27680-201ENSMUST00000184192 160 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm10766-202ENSMUST00000194123 606 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm44344-201ENSMUST00000200287 129 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm3222-201ENSMUST00000071282 990 ntBASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lrrc40Q9CRC8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm13385-201ENSMUST00000121089 220 ntBASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm27618-201ENSMUST00000183671 60 ntBASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Matn2-206ENSMUST00000228570 2798 ntBASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lrrc40Q9CRC8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.67□□□□□ -0.22
Lrrc40Q9CRC8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms