Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt88Q9CPR6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.42□□□□□ -0.42
Krt88Q9CPR6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Gm9385-201ENSMUST00000117563 472 ntBASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt88Q9CPR6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt88Q9CPR6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt88Q9CPR6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms