Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Gm25116-201ENSMUST00000157191 122 ntBASIC13.71□□□□□ -0.21
Trim33Q99PP7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Gm3436-201ENSMUST00000179930 840 ntBASIC13.71□□□□□ -0.21
Trim33Q99PP7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim33Q99PP7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim33Q99PP7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim33Q99PP7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim33Q99PP7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim33Q99PP7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Gm15460-201ENSMUST00000118147 391 ntBASIC13.7□□□□□ -0.22
Trim33Q99PP7 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.7□□□□□ -0.22
Trim33Q99PP7 Gm12151-201ENSMUST00000121374 290 ntBASIC13.7□□□□□ -0.22
Trim33Q99PP7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Auts2-212ENSMUST00000178555 309 ntBASIC13.7□□□□□ -0.22
Trim33Q99PP7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.7□□□□□ -0.22
Trim33Q99PP7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.7□□□□□ -0.22
Trim33Q99PP7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim33Q99PP7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.69□□□□□ -0.22
Trim33Q99PP7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.69□□□□□ -0.22
Trim33Q99PP7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Gm18027-201ENSMUST00000218947 619 ntBASIC13.69□□□□□ -0.22
Trim33Q99PP7 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.69□□□□□ -0.22
Trim33Q99PP7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.69□□□□□ -0.22
Trim33Q99PP7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim33Q99PP7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms