Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh15Q99PJ1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh15Q99PJ1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh15Q99PJ1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Gm3508-201ENSMUST00000186012 792 ntBASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Gm45118-201ENSMUST00000208928 825 ntBASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh15Q99PJ1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm26361-201ENSMUST00000158868 186 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm7003-201ENSMUST00000195089 312 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm8712-201ENSMUST00000221090 701 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gm14704-201ENSMUST00000120300 874 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh15Q99PJ1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms