Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Gm3786-201ENSMUST00000202659 378 ntBASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx6-1Q99MA9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx6-1Q99MA9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Nkx6-1Q99MA9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.9□□□□□ -0.35
Nkx6-1Q99MA9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.35
Nkx6-1Q99MA9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Mir5132-201ENSMUST00000175166 71 ntBASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Gm38341-201ENSMUST00000195357 515 ntBASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Gm9368-201ENSMUST00000219348 831 ntBASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.89□□□□□ -0.35
Nkx6-1Q99MA9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gm18753-201ENSMUST00000201000 566 ntBASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gm6334-201ENSMUST00000207083 228 ntBASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Cts7-204ENSMUST00000225321 1257 ntBASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gm5161-201ENSMUST00000075243 853 ntBASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.88□□□□□ -0.35
Nkx6-1Q99MA9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.87□□□□□ -0.35
Nkx6-1Q99MA9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms