Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm8652-201ENSMUST00000181363 964 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm27572-201ENSMUST00000183702 255 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm17794-201ENSMUST00000220252 955 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.08□□□□□ -0.48
Scrt1Q99M85 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Scrt1Q99M85 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Gm27486-201ENSMUST00000184923 80 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Gm43179-201ENSMUST00000198797 275 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scrt1Q99M85 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scrt1Q99M85 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.07□□□□□ -0.48
Scrt1Q99M85 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Snora78-201ENSMUST00000158630 128 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Gm2495-201ENSMUST00000191160 466 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Gm7561-201ENSMUST00000211203 886 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scrt1Q99M85 Gm6091-201ENSMUST00000098307 165 ntBASIC12.06□□□□□ -0.48
Scrt1Q99M85 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Scrt1Q99M85 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms