Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Gm10156-201ENSMUST00000122364 462 ntBASIC15.82■□□□□ 0.12
Rfc4Q99J62 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.82■□□□□ 0.12
Rfc4Q99J62 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Gm19184-201ENSMUST00000196798 928 ntBASIC15.82■□□□□ 0.12
Rfc4Q99J62 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.82■□□□□ 0.12
Rfc4Q99J62 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.82■□□□□ 0.12
Rfc4Q99J62 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfc4Q99J62 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.81■□□□□ 0.12
Rfc4Q99J62 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.81■□□□□ 0.12
Rfc4Q99J62 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfc4Q99J62 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.8■□□□□ 0.12
Rfc4Q99J62 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.8■□□□□ 0.12
Rfc4Q99J62 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.8■□□□□ 0.12
Rfc4Q99J62 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.8■□□□□ 0.12
Rfc4Q99J62 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfc4Q99J62 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.79■□□□□ 0.12
Rfc4Q99J62 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc4Q99J62 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms